E2 10-2735 - SRA

SRX1896752: E2 10-2735
2 ILLUMINA (Illumina MiSeq) runs: 1.5M spots, 802.5M bases, 405.2Mb downloads

Submitted by: Health Canada

Study: Single Nucleotide Polymorphism (SNP) Variation in Foodborne Isolates After 100 Subcultures

PRJNA327110 • SRP077868 • All experiments • All runs

Single Nucleotide Polymorphism (SNP) Variation in Foodborne Isolates After 100 Subcultures. We made subcultures every 24 hours, so day 100 was actually subculture 100. For each of the 16 samples it was Day 1 and Day 100 of the a single culture. Day 100 of the *HPB2863_1 *does not have a day 100 culture since it was shown to be contaminated.

Sample: Pathogen: clinical or host-associated sample from Escherichia coli st. 10-2735

SAMN05301320 • SRS1539760 • All experiments • All runs

Organism: Escherichia coli

Library:

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward302 reverse

Runs: 2 runs, 1.5M spots, 802.5M bases, 405.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR3742526	687,981	354.4M	191.7Mb	2017-01-01
SRR3742530	849,907	448.2M	213.5Mb	2017-01-01

ID:: 2744660

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